Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859737.1_cds_XP_016514446.1_26894
CDS Infomation

[gene=LOC107831217] [db_xref=GeneID:107831217] [protein=transcription factor bHLH112-like] [protein_id=XP_016514446.1] [location=complement(join(89273..89428,89857..89910,91117..91182,91329..91394,91507..91614,91976..92543,92823..93193))] [gbkey=CDS]
Sequence

ATGGCAGAAGAATTTCAGCTAGGTAGAGGAAACTGGTGGGAGTCGTCATCATCAACAACA
ACAACAACATCATCGTCTAGGAATAATAAGTTTGAAAGTGGAATATTATCATCTACTACT
ACTACTATGTCTTCAGTATCCACCGCACTAAATAGCATGGCAAGCAACTTTGGTTGTTGG
CCGACAGAAATTGAGGATATTAAAGCTAGATCTTCCTTGAATCCTGTGTCTGTGTCGGCA
TCTGATAGTAGCTCTATGGTTTTTCCAGCTGATCCCCAGAAACTCCACGCCTCTGAATCT
GGTGCTCTAAATTTGCAAGTCATGGGCTTAGGTCTACCATCCCAAGGACTTGATTGGAAC
CAACCTTTCTTCCGCGGTGAAAAAGCTGGGAGTGGCTTTCGTTCCATACTTGAAGAAGGG
CTGAGCTCGGATGCAAATTATCAGCAAGAAGGATCATGTCAGCAAGATCATCATTGGACG
CAGAAAATATATACTGGGAATGACTATAATAATAAGCAAATGGACCGGGGTATTTCTTTA
GATCATCAACCAGTATTTAATGCTCCAAATATGAGCTCAAATCTTGATAAAGCACCTTAT
GGAAGTCCTTCAAATATGTTACAAGGACTCTTAATTTCTGATAGTCACCAAGAATCCAAC
TTTACAAGTGCTACATCGCTATATTATCCTCCCTATAACCCATCGAATTGTGACGTCAAT
CATGCAGCAGCTGACGTAATGCCCGCTTCATCTTCATCTTCTTCTTGGTCTAAATTTCCG
AAACAGCAGTGGCCGATGCCGCTGCCTCACGGCCAGTCGCATTTCTCTGGCACTCCTTTC
TGGAATGCCACGTCAGCTTCCATGGACGATGTTCGCTCAGGTTTCCACCTCCCATCTATA
CATCAGCAGCTTCCCAACCCAGTTGATACGAAACCAAAGCATACAGCTGAAGATAAGAAT
ATAAGAACAATAGCAAAGAGAAGTGGCAGTGAAACGTCAAATAAGAGACCACGGAATGAA
GCGCCATCTCAAATGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGAGACAGAATCACT
GCCCTTCAACAATTAGTCTCACCTTTTGGAAAGACTGATACAGCTTCTGTGCTCTCCGAA
GCGATTGAGTACATAAAATTCCTCCATGAGCAAGTCAATGTCTTAAGCACCCCATACATG
AAAAGTGGAGCTTCCAGGCAGCAACATCAGCAGAGTACTGGTGATAGATCCAATGTTAAT
CCAGAAGGAGCAAAGCAAGATCTTAGAAGTCGAGGATTATGTTTGGTCCCAGTTTCTAGC
ACCTTTCCCGTAACTCATGAAACGACAGTAGATTTTTGGACACCAACATTTGGAGGAACA
TTCAGATAA

Peptide Sequence

PEP ID

XP_016514446.1
PEP Infomation

PREDICTED: transcription factor bHLH112-like [Nicotiana tabacum]
Sequence

MAEEFQLGRGNWWESSSSTTTTTSSSRNNKFESGILSSTTTTMSSVSTALNSMASNFGCW
PTEIEDIKARSSLNPVSVSASDSSSMVFPADPQKLHASESGALNLQVMGLGLPSQGLDWN
QPFFRGEKAGSGFRSILEEGLSSDANYQQEGSCQQDHHWTQKIYTGNDYNNKQMDRGISL
DHQPVFNAPNMSSNLDKAPYGSPSNMLQGLLISDSHQESNFTSATSLYYPPYNPSNCDVN
HAAADVMPASSSSSSWSKFPKQQWPMPLPHGQSHFSGTPFWNATSASMDDVRSGFHLPSI
HQQLPNPVDTKPKHTAEDKNIRTIAKRSGSETSNKRPRNEAPSQMPAFKVRKEKMGDRIT
ALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVNVLSTPYMKSGASRQQHQQSTGDRSNVN
PEGAKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR

Transcript Sequence

Gene sequence data has not been registered.